Stem-loop oan-mir-1422h

Accession

MI0006713

Description

Ornithorhynchus anatinus oan-mir-1422h precursor miRNA

Sequence

16996 reads, 7574 reads per million, 4 experiments

acaucaugauucugguuUUAGUCAUGAAAGCGUUUUUUCaguauuaauaauuggGAAAUCGUUGUCAUGACUGAGCccaugaucauauuaugu
((((.((((((.(((.(((((((((((.((((.(((((((((.......))))))))).)))).))))))))))).))).))))))...))))

Structure

    --c      c   u           A    U         au 
acau   augauu ugg uUUAGUCAUGA AGCG UUUUUCagu  u
||||   |||||| ||| ||||||||||| |||| |||||||||  a
ugua   uacuag acc GAGUCAGUACU UUGC AAAGgguua  a
    uua      u   C           G    U         au 

Annotation confidence High

Genome context

Contig11344: 3983-4075 [-]

Clustered miRNAs

9 other miRNAs are < 10 kb from oan-mir-1422h

Mature oan-miR-1422h-5p

• Accession: MIMAT0006883
• Description: Ornithorhynchus anatinus oan-miR-1422h-5p mature miRNA
• Sequence: 18 - UUAGUCAUGAAAGCGUUUUUUC - 39
• Evidence: experimental ; Illumina [1]

Mature oan-miR-1422h-3p

• Accession: MIMAT0006884
• Description: Ornithorhynchus anatinus oan-miR-1422h-3p mature miRNA
• Sequence: 55 - GAAAUCGUUGUCAUGACUGAGC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004