Stem-loop oan-let-7b

Accession

MI0006720

Description

Ornithorhynchus anatinus oan-let-7b precursor miRNA

Sequence

813168 reads, 12326 reads per million, 5 experiments

gggaUGAGGUAGUAGGUUGUGUGGUUucaggggagugauuuugccccaaucagaagauaaCUAUACAGCCUACUGCCUUCcc
((((..((((((((((((((((((((...((((..........)))).(((....)))))))))))))))))))))))))))

Structure

    UG                    --------uca    agug 
ggga  AGGUAGUAGGUUGUGUGGUU           gggg    a
||||  ||||||||||||||||||||           ||||     
ccCU  UCCGUCAUCCGACAUAUCaa           cccc    u
    --                    uagaagacuaa    guuu 

Annotation confidence High

Genome context

Contig12225: 14105-14186 [-]

Mature oan-let-7b-5p

• Accession: MIMAT0006897
• Description: Ornithorhynchus anatinus oan-let-7b-5p mature miRNA
• Sequence: 5 - UGAGGUAGUAGGUUGUGUGGUU - 26
• Evidence: experimental ; Illumina [1]

Mature oan-let-7b-3p

• Accession: MIMAT0006898
• Description: Ornithorhynchus anatinus oan-let-7b-3p mature miRNA
• Sequence: 61 - CUAUACAGCCUACUGCCUUC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004