Stem-loop oan-mir-460

Accession

MI0006730

Description

Ornithorhynchus anatinus oan-mir-460 precursor miRNA

Sequence

1342 reads, 30.0 reads per million, 5 experiments

ugacuguauagaaCCUGCAUUGUACACACUGUGUGucucgcucucugcaCACAGCGCGUACAAUGUGGAUAcuauagaaguca
(((((.(((((...(((((((((((.(.((((((((..........)))))))).).)))))))))))...)))))..)))))

Structure

     -g     aaC           A A        cucg 
ugacu  uauag   CUGCAUUGUAC C CUGUGUGu    c
|||||  |||||   ||||||||||| | ||||||||     
acuga  auauc   GGUGUAACAUG G GACACacg    u
     ag     AUA           C C        ucuc 

Annotation confidence High

Genome context

13: 1810839-1810921 [+]

Mature oan-miR-460-5p

• Accession: MIMAT0006915
• Description: Ornithorhynchus anatinus oan-miR-460-5p mature miRNA
• Sequence: 14 - CCUGCAUUGUACACACUGUGUG - 35
• Evidence: experimental ; Illumina [1]

Mature oan-miR-460-3p

• Accession: MIMAT0006916
• Description: Ornithorhynchus anatinus oan-miR-460-3p mature miRNA
• Sequence: 50 - CACAGCGCGUACAAUGUGGAUA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004