Stem-loop oan-mir-1346

Accession

MI0006733

Description

Ornithorhynchus anatinus oan-mir-1346 precursor miRNA

Sequence

18 reads, 2 reads per million, 5 experiments

gaggggucaguucaaucguucuccaccaaaagauggacaggaaacaGUGGGUUGGGGGCGGGGGcugcucuuc
((((((.((((((..((((((((.(((......((.........))...))).))))))))))))))))))))

Structure

      u      aa        c   aaaaga  gac 
gagggg caguuc  ucguucuc acc      ug   a
|||||| ||||||  |||||||| |||      ||   g
cuucuc gucGGG  GGCGGGGG UGG      ac   g
      -      --        U   ---GUG  aaa 

Annotation confidence Not enough data

Genome context

Contig341: 601303-601375 [-]

Mature oan-miR-1346

• Accession: MIMAT0006919
• Description: Ornithorhynchus anatinus oan-miR-1346 mature miRNA
• Sequence: 47 - GUGGGUUGGGGGCGGGGG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004