Stem-loop oan-mir-186

Accession

MI0006741

Description

Ornithorhynchus anatinus oan-mir-186 precursor miRNA

Sequence

49457 reads, 1008 reads per million, 5 experiments

gcucauaacuuucCAAAGAAUUCUCCUUUUGGGCUuucuaugcuuggucacagCCCAAAGGUGAAUUUUUUGGGAaguuugagc
(((((.(((((((((((((((((.(((((.(((((..(((....)))....)))))))))).))))))))))))))))))))))

Structure

     u                 U     U     --uu   u 
gcuca aacuuucCAAAGAAUUC CCUUU GGGCU    cua g
||||| ||||||||||||||||| ||||| |||||    |||  
cgagu uugaAGGGUUUUUUAAG GGAAA CCCga    ggu c
     -                 U     -     cacu   u 

Annotation confidence Medium

Genome context

Contig1838: 19911-19994 [+]

Mature oan-miR-186-5p

• Accession: MIMAT0006931
• Description: Ornithorhynchus anatinus oan-miR-186-5p mature miRNA
• Sequence: 14 - CAAAGAAUUCUCCUUUUGGGCU - 35
• Evidence: experimental ; Illumina [1]

Mature oan-miR-186-3p

• Accession: MIMAT0006932
• Description: Ornithorhynchus anatinus oan-miR-186-3p mature miRNA
• Sequence: 54 - CCCAAAGGUGAAUUUUUUGGGA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004