Stem-loop oan-mir-1357

Accession

MI0006760

Description

Ornithorhynchus anatinus oan-mir-1357 precursor miRNA

Sequence

730 reads, 43 reads per million, 5 experiments

gucccagugaauggcaagAUUAUGAGAUCUGAGGGCCcucccccgggggcgccgagugcuccuuagccuuccucggguc
..(((((.(((.((((((.....(((..((..(.((((((....)))))).)..))..)))))).)))))))).)))..

Structure

gu   -  u   u   -   AUUAU   AU  GA G      c 
  ccc ag gaa ggc aag     GAG  CU  G GCCcuc c
  ||| || ||| ||| |||     |||  ||  | ||||||  
  ggg uc cuu ccg uuc     cuc  ga  c cggggg c
cu   c  -   -   a   -----   gu  gc g      c 

Annotation confidence Not enough data

Genome context

Contig2253: 61305-61383 [+]

Mature oan-miR-1357

• Accession: MIMAT0006960
• Description: Ornithorhynchus anatinus oan-miR-1357 mature miRNA
• Sequence: 19 - AUUAUGAGAUCUGAGGGCC - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004