Stem-loop oan-mir-26-1

Accession

MI0006777

Description

Ornithorhynchus anatinus oan-mir-26-1 precursor miRNA

Sequence

239263 reads, 5067 reads per million, 5 experiments

ggcucccgcccggUUCAAGUAAUCCAGGAUAGGCUgucggcaccacggCCUGUCCUCGGUUACUUGUCUCgggagguggcc
((((.((.(((((..(((((((((.((((((((((((.(....))))))))))))).)))))))))..))))).)).))))

Structure

    c  g     UU         C            c g 
ggcu cc cccgg  CAAGUAAUC AGGAUAGGCUgu g c
|||| || |||||  ||||||||| |||||||||||| |  
ccgg gg gggCU  GUUCAUUGG UCCUGUCCggca c a
    u  a     CU         C            - c 

Annotation confidence High

Genome context

Contig26164: 9817-9897 [-]

Mature oan-miR-26-5p

• Accession: MIMAT0006991
• Description: Ornithorhynchus anatinus oan-miR-26-5p mature miRNA
• Sequence: 14 - UUCAAGUAAUCCAGGAUAGGCU - 35
• Evidence: experimental ; Illumina [1]

Mature oan-miR-26-1-3p

• Accession: MIMAT0006992
• Description: Ornithorhynchus anatinus oan-miR-26-1-3p mature miRNA
• Sequence: 49 - CCUGUCCUCGGUUACUUGUCUC - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004