Stem-loop oan-mir-101-1

Accession

MI0006790

Description

Ornithorhynchus anatinus oan-mir-101-1 precursor miRNA

Sequence

753451 reads, 13609.0 reads per million, 5 experiments

ggcugcccuggcUCAGUUAUCACAGUGCUGAUGCuguccauucuaaaggUACAGUACUGUGAUAACUGAAGgauggcagcc
(((((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....)))))))

Structure

       cuggc                  A    gucca 
ggcugcc     UCAGUUAUCACAGUGCUG UGCu     u
|||||||     |||||||||||||||||| ||||      
ccgacgg     AGUCAAUAGUGUCAUGAC AUgg     u
       uagGA                  -    aaauc 

Annotation confidence High

Genome context

18: 41083094-41083174 [+]

Mature oan-miR-101-1-5p

• Accession: MIMAT0061403
• Description: Ornithorhynchus anatinus oan-miR-101-1-5p mature miRNA
• Sequence: 13 - UCAGUUAUCACAGUGCUGAUGC - 34
• Evidence: experimental ; Illumina [1]

Mature oan-miR-101-3p

• Accession: MIMAT0007011
• Description: Ornithorhynchus anatinus oan-miR-101-3p mature miRNA
• Sequence: 50 - UACAGUACUGUGAUAACUGAAG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004