Stem-loop oan-mir-101-1

Accession

MI0006790

Description

Ornithorhynchus anatinus oan-mir-101-1 precursor miRNA

Sequence

664332 reads, 11012 reads per million, 5 experiments

ggcugcccuggcucaguuaucacagugcugaugcuguccauucuaaaggUACAGUACUGUGAUAACUGAAGgauggcagcc
(((((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....)))))))

Structure

       cuggc                  a    gucca 
ggcugcc     ucaguuaucacagugcug ugcu     u
|||||||     |||||||||||||||||| ||||      
ccgacgg     AGUCAAUAGUGUCAUGAC AUgg     u
       uagGA                  -    aaauc 

Annotation confidence High

Genome context

Contig3105: 5089-5169 [-]

Mature oan-miR-101

• Accession: MIMAT0007011
• Description: Ornithorhynchus anatinus oan-miR-101 mature miRNA
• Sequence: 50 - UACAGUACUGUGAUAACUGAAG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004