Stem-loop oan-mir-1365

Accession

MI0006801

Description

Ornithorhynchus anatinus oan-mir-1365 precursor miRNA

Sequence

17728 reads, 387.0 reads per million, 5 experiments

UACUGGGCACCACCUGUAUGCAgagcauuauacuagaugCCUACUGGAGUGCCUAGCACu
..((((((((..((.((....((.(((((......))))))))).)).))))))))....

Structure

--UA        CA  U  AUGC  a     au 
    CUGGGCAC  CC GU    Ag gcauu  a
    ||||||||  || ||    || |||||   
    GAUCCGUG  GG CA    UC Cguag  c
uCAC        -A  U  ----  -     au 

Annotation confidence Low

Genome context

3: 140252531-140252590 [-]

Mature oan-miR-1365-5p

• Accession: MIMAT0007028
• Description: Ornithorhynchus anatinus oan-miR-1365-5p mature miRNA
• Sequence: 1 - UACUGGGCACCACCUGUAUGCA - 22
• Evidence: experimental ; Illumina [1]

Mature oan-miR-1365-3p

• Accession: MIMAT0007029
• Description: Ornithorhynchus anatinus oan-miR-1365-3p mature miRNA
• Sequence: 40 - CCUACUGGAGUGCCUAGCAC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004