miRBase entry: oan-mir-1368

Stem-loop oan-mir-1368


Accession
MI0006804
Description
Ornithorhynchus anatinus oan-mir-1368 precursor miRNA


Sequence

1139 reads, 25.0 reads per million, 5 experiments
gaaauuCCUGAAUGUAAUUUAGUGGCAgcuaucaucucccauuugucaccuauguggagaaucuugaauacaaaggauaaguacguacaaauauugugacuguuacauugugagcauuuaauc
........(((((((.((...(((((((......((((((((.........))).)))))(((((........))))).......(((((...))))).)))))))...))..)))))))...

Structure
gaaauuCC       -A  UUA       ---------------------------------cuauca     -   uug 
        UGAAUGU  AU   GUGGCAg                                       ucucc cau   u
        |||||||  ||   |||||||                                       ||||| |||   c
        auuuacg  ug   cauuguc                                       agagg gua   a
-----cua       ag  uua       aguguuauaaacaugcaugaauaggaaacauaaguucua     u   ucc 


Annotation confidence Not enough data
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Genome context
X1: 71429420-71429542 [+]

Database links

Mature oan-miR-1368-5p

Accession MIMAT0007033
Description Ornithorhynchus anatinus oan-miR-1368-5p mature miRNA
Sequence 7 - CCUGAAUGUAAUUUAGUGGCA - 27
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004