Stem-loop oan-mir-1373

Accession

MI0006820

Description

Ornithorhynchus anatinus oan-mir-1373 precursor miRNA

Sequence

106 reads, 3 reads per million, 5 experiments

gugcucgagcgguacAGCCGAAUGAAUGAAAGUGGGAuucguucauucauucauucgacgguauuuaccgagcgc
(((((((...(((((.(.(((((((((((..(((((.....)))))))))))))))).).)))))...)))))))

Structure

       agc     A C           AA     A 
gugcucg   gguac G CGAAUGAAUGA  GUGGG u
|||||||   ||||| | |||||||||||  ||||| u
cgcgagc   uuaug c gcuuacuuacu  uacuu c
       cau     g a           --     g 

Annotation confidence Not enough data

Genome context

Contig59: 2114997-2115071 [-]

Mature oan-miR-1373

• Accession: MIMAT0007054
• Description: Ornithorhynchus anatinus oan-miR-1373 mature miRNA
• Sequence: 16 - AGCCGAAUGAAUGAAAGUGGGA - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004