Stem-loop oan-mir-1374

Accession

MI0006821

Description

Ornithorhynchus anatinus oan-mir-1374 precursor miRNA

Sequence

22 reads, 1 reads per million, 3 experiments

aggugccugaguggucagccUGUUUCCUGGGGCUUCCCUGUugcugcuuccaguuugggucaccaugggaguuccagggaucgugcugccccccuggguccu
(((.(((((.(.((.((((.((.((((((((((((((.....((((....)))).(((....))).)))))))))))))).)).)))).)).).))))))))

Structure

   u     a u  u    c  U              -------CUGUu    c 
agg gccug g gg cagc UG UUCCUGGGGCUUCC            gcug u
||| ||||| | || |||| || ||||||||||||||            ||||  
ucc ugggu c cc gucg gc agggaccuugaggg            ugac u
   -     c c  c    u  u              uaccacuggguu    c 

Annotation confidence Not enough data

Genome context

Contig59: 2576303-2576404 [+]

Mature oan-miR-1374

• Accession: MIMAT0007055
• Description: Ornithorhynchus anatinus oan-miR-1374 mature miRNA
• Sequence: 21 - UGUUUCCUGGGGCUUCCCUGU - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004