miRBase entry: oan-mir-130a

Stem-loop oan-mir-130a


Accession
MI0006844
Description
Ornithorhynchus anatinus oan-mir-130a precursor miRNA


Sequence

77 reads, 2.0 reads per million, 5 experiments
gcccgguccuguccuucgcucccggccggAGCUCUUUUCACAUUGUGCUACugucugcgcccgucacuagcagugcaauguaauaaggggcuucggcggggcagcugcuaccaucuccgggu
((((((...((......((((((.(((((((((((((..((((((((((.(((...((....))...))).))))))))))...))))))))))))).))).)))......))...))))))

Structure
      ucc  uccuuc   -   g             -UC          A   ucu  g 
gcccgg   ug      gcu ccc gccggAGCUCUUU   ACAUUGUGCU Cug   gc c
||||||   ||      ||| ||| |||||||||||||   |||||||||| |||   ||  
ugggcc   ac      cga ggg cggcuucggggaa   uguaacguga gau   ug c
      ucu  caucgu   c   g             uaa          c   cac  c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
3: 19258630-19258748 [-]

Database links

Mature oan-miR-130a-5p

Accession MIMAT0007098
Description Ornithorhynchus anatinus oan-miR-130a-5p mature miRNA
Sequence 30 - AGCUCUUUUCACAUUGUGCUAC - 51
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004