Stem-loop oan-mir-1377

Accession

MI0006849

Description

Ornithorhynchus anatinus oan-mir-1377 precursor miRNA

Sequence

6 reads, 1 reads per million, 4 experiments

ucccggcguugaguacggugcucugcccaCAGUAAGUGCUUAAUAAGGAAUaaugacuacucuuguuauguucuuuauuaaacgcuuacuaugugccgggcgccauuugaagcacuggga
((((((.(((......(((((((.((.((.((((((((.(((((((((((((.((((.......))))))))))))))))).)))))))).)).)).)))))))......))).))))))

Structure

      c   gaguac       u  c  C        C             a    ua 
ucccgg guu      ggugcuc gc ca AGUAAGUG UUAAUAAGGAAUa ugac  c
|||||| |||      ||||||| || || |||||||| ||||||||||||| ||||  u
aggguc cga      ccgcggg cg gu ucauucgc aauuauuucuugu auug  c
      a   aguuua       c  u  a        a             -    uu 

Annotation confidence Not enough data

Genome context

Contig8551: 8746-8865 [-]

Mature oan-miR-1377

• Accession: MIMAT0007107
• Description: Ornithorhynchus anatinus oan-miR-1377 mature miRNA
• Sequence: 30 - CAGUAAGUGCUUAAUAAGGAAU - 51
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004