Stem-loop oan-mir-124a-1

Accession

MI0006854

Description

Ornithorhynchus anatinus oan-mir-124a-1 precursor miRNA

Sequence

86710 reads, 1452 reads per million, 5 experiments

cacuaggccugucucucCGUGUUCACAGCGGACCUUGAUuuaaauuuguacacaauUAAGGCACGCGGUGAAUGCCAagagcccagccaaag
.....(((..(.((((..((((((((.(((..((((((((.............))))))))..))).))))))))..)))).)..)))....

Structure

cacua   cu u    cC        A   GA        uaaau 
     ggc  g cucu  GUGUUCAC GCG  CCUUGAUu     u
     |||  | ||||  |||||||| |||  ||||||||     u
     ccg  c gaga  CGUAAGUG CGC  GGAAUuaa     g
-gaaa   ac c    AC        G   AC        cacau 

Annotation confidence Medium

Genome context

Contig9524: 20318-20409 [+]

Mature oan-miR-124a-5p

• Accession: MIMAT0007113
• Description: Ornithorhynchus anatinus oan-miR-124a-5p mature miRNA
• Sequence: 18 - CGUGUUCACAGCGGACCUUGAU - 39
• Evidence: experimental ; Illumina [1]

Mature oan-miR-124a-1-3p

• Accession: MIMAT0007114
• Description: Ornithorhynchus anatinus oan-miR-124a-1-3p mature miRNA
• Sequence: 57 - UAAGGCACGCGGUGAAUGCCA - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004