Stem-loop oan-mir-1379

Accession

MI0006855

Description

Ornithorhynchus anatinus oan-mir-1379 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

ucccgagcgucugguacggcgcucugcccgcgggaggcgcccgucugacaccgguuucuucucagcggCGCGGGCUGAGCGCCUAACGUGggccgagcgccgcacccaacgccgggg
.((((.((((..(((.((((((((.(((((((..(((((((.(((((.(.(((.(........).))).)))))).).))))))..))))))).)))))))).)))..)))))))).

Structure

u    a    cu   a        u       gg      - c     a a   g uuc 
 cccg gcgu  ggu cggcgcuc gcccgcg  aggcgc c gucug c ccg u   u
 |||| ||||  ||| |||||||| |||||||  |||||| | ||||| | ||| |    
 gggc cgca  cca gccgcgag cggGUGC  UCCGCG G CGGGC G ggc a   u
g    -    ac   c        c       AA      A U     - C   g cuc 

Annotation confidence Not enough data

Genome context

Contig99552: 84-200 [-]

Mature oan-miR-1379

• Accession: MIMAT0007115
• Description: Ornithorhynchus anatinus oan-miR-1379 mature miRNA
• Sequence: 69 - CGCGGGCUGAGCGCCUAACGUG - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004