Stem-loop oan-mir-429

Accession

MI0006862

Description

Ornithorhynchus anatinus oan-mir-429 precursor miRNA

Sequence

11275 reads, 299 reads per million, 5 experiments

cggcguggaggugccugcugauuggugUCUUACCAGACAAAGUUAGAUcugacuauuuucgucUAAUACUGUCUGGUAAUGCCGUcaaucacagcggcaagaucuucgucug
.((((.(((..((((.(((((((((((.(((((((((((..(((((((..((......)))))))))..)))))))))).).))))))))..)))))))...))).))))..

Structure

-c    u   -gg    u   --        U -          AA       cu  cu 
  ggcg gga   ugcc gcu  gauuggug C UUACCAGACA  GUUAGAU  ga  a
  |||| |||   |||| |||  |||||||| | ||||||||||  |||||||  ||   
  cugc ucu   acgg cga  cuaacUGC G AAUGGUCUGU  UAAUcug  cu  u
gu    u   aga    -   ca        C U          CA       --  uu 

Annotation confidence High

Genome context

Ultra168: 328495-328606 [+]

Mature oan-miR-429-5p

• Accession: MIMAT0007127
• Description: Ornithorhynchus anatinus oan-miR-429-5p mature miRNA
• Sequence: 28 - UCUUACCAGACAAAGUUAGAU - 48
• Evidence: experimental ; Illumina [1]

Mature oan-miR-429-3p

• Accession: MIMAT0007128
• Description: Ornithorhynchus anatinus oan-miR-429-3p mature miRNA
• Sequence: 64 - UAAUACUGUCUGGUAAUGCCGU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004