miRBase entry: oan-mir-1383

Stem-loop oan-mir-1383


Accession
MI0006864
Description
Ornithorhynchus anatinus oan-mir-1383 precursor miRNA


Sequence


uucucacuaaggcacaauggagccuuuuuucauaauggggaggguaucagaagccauaaguccuggcucacugguuuuuccUUGGUCCCCUUCCCCCCGgaaagaaacgcaggccuucauguagaa
.(((((..(((((........((.(((((((.....((((((((.(((((((((((..(((....)))...)))))))....)))).))))))))....)))))))..))..)))))..)).))).

Structure
u   -  cu     acaaugga  -c       auaau        u    ----       -ua   c 
 ucu ca  aaggc        gc  uuuuuuc     ggggaggg auca    gaagcca   agu c
 ||| ||  |||||        ||  |||||||     |||||||| ||||    |||||||   |||  
 aga gu  uuccg        cg  aagaaag     CCCUUCCC UGGU    uuuuggu   ucg u
a   u  ac     ------ga  ca       -GCCC        C    Uccu       cac   g 


Annotation confidence Not enough data
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Genome context
5: 10814901-10815026 [-]

Database links

Mature oan-miR-1383-3p

Accession MIMAT0007131
Description Ornithorhynchus anatinus oan-miR-1383-3p mature miRNA
Sequence 82 - UUGGUCCCCUUCCCCCCG - 99
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004