Stem-loop oan-mir-196b

Accession

MI0006869

Description

Ornithorhynchus anatinus oan-mir-196b precursor miRNA

Sequence

21187 reads, 537 reads per million, 4 experiments

aacuggucugugauuUAGGUAGUUUCCUGUUGUUGGggcuccaccuuucucuCGACAGCACGACACUGCCUUCAuuacuucaguu
((((((...(((((..(((((((.((.(((((((((((...........))))))))))).)).)))))))..))))).))))))

Structure

      ucu     uU       U  C           cucc 
aacugg   gugau  AGGUAGU UC UGUUGUUGGgg    a
||||||   |||||  ||||||| || |||||||||||    c
uugacu   cauuA  UCCGUCA AG ACGACAGCucu    c
      --u     CU       C  C           cuuu 

Annotation confidence Not enough data

Genome context

Ultra231: 2305902-2305986 [-]

Mature oan-miR-196b-5p

• Accession: MIMAT0007139
• Description: Ornithorhynchus anatinus oan-miR-196b-5p mature miRNA
• Sequence: 16 - UAGGUAGUUUCCUGUUGUUGG - 36
• Evidence: experimental ; Illumina [1]

Mature oan-miR-196b-3p

• Accession: MIMAT0007140
• Description: Ornithorhynchus anatinus oan-miR-196b-3p mature miRNA
• Sequence: 53 - CGACAGCACGACACUGCCUUCA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004