Stem-loop oan-mir-1385

Accession

MI0006878

Description

Ornithorhynchus anatinus oan-mir-1385 precursor miRNA

Sequence

45 reads, 1.0 reads per million, 4 experiments

ccgcgaggccUACCGCGUCCACCUGAGGGGAcccguccugugccgcgggagcccgggcgggcggggaggccucgugg
(((((((((((.((.(((((.(((..(((..(((((........)))))..)))))).))))).)))))))))))))

Structure

           A  G     A   GA   GA     ccu 
ccgcgaggccU CC CGUCC CCU  GGG  cccgu   g
||||||||||| || ||||| |||  |||  |||||    
ggugcuccgga gg gcggg ggg  ccc  gggcg   u
           -  g     c   --   ga     ccg 

Annotation confidence Not enough data

Genome context

1: 870099-870175 [+]

Mature oan-miR-1385-5p

• Accession: MIMAT0007151
• Description: Ornithorhynchus anatinus oan-miR-1385-5p mature miRNA
• Sequence: 11 - UACCGCGUCCACCUGAGGGGA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004