Stem-loop oan-mir-191

Accession

MI0006879

Description

Ornithorhynchus anatinus oan-mir-191 precursor miRNA

Sequence

15535 reads, 360.0 reads per million, 5 experiments

uggagcauccuugacagcuugacagcaggCAACGGAAUCCCAAAAGCAGCUGuugucuccagagcauuccagCUGCAGUUGGAUUUCGUUCCCugcuauccugcaagagcacca
(((.((...((((.(((...((.((((((.((((((((((.((..(((((((.(((.......)))...)))))))..)))))))))))).)))))).))))))))).)).)))

Structure

   a  auc    a   cuu  c      C          C  AA       --u   cu 
ugg gc   cuug cag   ga agcagg AACGGAAUCC AA  GCAGCUG   ugu  c
||| ||   |||| |||   || |||||| |||||||||| ||  |||||||   |||  c
acc cg   gaac guc   cu ucguCC UUGCUUUAGG UU  CGUCgac   acg  a
   a  --a    -   ---  a      C          -  GA       cuu   ag 

Annotation confidence High

Genome context

X1: 91032799-91032912 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from oan-mir-191

Mature oan-miR-191-5p

• Accession: MIMAT0007152
• Description: Ornithorhynchus anatinus oan-miR-191-5p mature miRNA
• Sequence: 30 - CAACGGAAUCCCAAAAGCAGCUG - 52
• Evidence: experimental ; Illumina [1]

Mature oan-miR-191-3p

• Accession: MIMAT0007153
• Description: Ornithorhynchus anatinus oan-miR-191-3p mature miRNA
• Sequence: 73 - CUGCAGUUGGAUUUCGUUCCC - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004