Stem-loop oan-mir-128-2

Accession

MI0006892

Description

Ornithorhynchus anatinus oan-mir-128-2 precursor miRNA

Sequence

112330 reads, 1969.0 reads per million, 5 experiments

cagggcuggcgauuggacagccggaagGGGGGCCGUUACACUGUAAGAGAgugaguaccaggucUCACAGUGAACCGGUCUCUUUcccgacuggaucuggcucccagacgg
.....((((.((((((((((.(((.((((((((((...((((((..((((.(........).))))))))))...)))))))))).))).)))..))))).))))))....

Structure

caggg    c  -     --   c   a          UUA      AA    g gag 
     cugg ga uugga  cag cgg agGGGGGCCG   CACUGU  GAGA u   u
     |||| || |||||  ||| ||| ||||||||||   ||||||  |||| |    
     gacc cu ggucu  guc gcc UUUCUCUGGC   GUGACA  CUcu g   a
-ggca    -  c     ag   a   c          CAA      --    g acc 

Annotation confidence High

Genome context

21: 4813568-4813678 [+]

Mature oan-miR-128-5p

• Accession: MIMAT0007175
• Description: Ornithorhynchus anatinus oan-miR-128-5p mature miRNA
• Sequence: 28 - GGGGGCCGUUACACUGUAAGAGA - 50
• Evidence: experimental ; Illumina [1]

Mature oan-miR-128-3p

• Accession: MIMAT0007006
• Description: Ornithorhynchus anatinus oan-miR-128-3p mature miRNA
• Sequence: 65 - UCACAGUGAACCGGUCUCUUU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004