Stem-loop oan-mir-1391

Accession

MI0006898

Description

Ornithorhynchus anatinus oan-mir-1391 precursor miRNA

Sequence

421 reads, 10 reads per million, 5 experiments

gaccccagaagguuugacacggggucuccugcugCGCCAGUAUCGGGUGGGUGAuggaugaacuuuaggcaguCUCCCACCCGGUAGUGGUGCUgcaagauucccaaucucaaagaggac
((((((..............))))))((.(((.((((((.(((((((((((.(((...(((...)))....))).))))))))))).)))))).))).)).(((...(((...)))))).

Structure

gaccccagaagguuugacacgggguc  c   u      G           U   -gga   a 
                          uc ugc gCGCCA UAUCGGGUGGG GAu    uga  
                          || ||| |||||| ||||||||||| |||    ||| c
                          ag acg CGUGGU AUGGCCCACCC Cug    auu  
------caggagaaacucuaacccuu  a   U      G           U   acgg   u 

Annotation confidence Not enough data

Genome context

Ultra413: 1051037-1051156 [-]

Mature oan-miR-1391-5p

• Accession: MIMAT0007185
• Description: Ornithorhynchus anatinus oan-miR-1391-5p mature miRNA
• Sequence: 35 - CGCCAGUAUCGGGUGGGUGA - 54
• Evidence: experimental ; Illumina [1]

Mature oan-miR-1391-3p

• Accession: MIMAT0007186
• Description: Ornithorhynchus anatinus oan-miR-1391-3p mature miRNA
• Sequence: 74 - CUCCCACCCGGUAGUGGUGCU - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004