Stem-loop oan-mir-1392

Accession

MI0006899

Description

Ornithorhynchus anatinus oan-mir-1392 precursor miRNA

Sequence

6 reads, 0 reads per million, 2 experiments

guaaaugcuggcuuuaggggauaaacaagcCGCUUCAUCAGGUGAAAAUGGAucuggagcucucccugugCAUUUGCACCUGGUGGAGCAGCuuguucaguccuacaagccagcugc
......(((((((((((((....(((((((.(((((((((((((.(((((.((..(((....)))..)).))))).))))))))))))).)))))))...))))).))))))))...

Structure

guaaau        -     gaua       C             A     G  cu   g 
      gcuggcuu uaggg    aacaagc GCUUCAUCAGGUG AAAUG Au  gga c
      |||||||| |||||    ||||||| ||||||||||||| ||||| ||  |||  
      cgaccgaa auccu    uuguuCG CGAGGUGGUCCAC UUUAC ug  ccu u
---cgu        c     -gac       A             G     g  uc   c 

Annotation confidence Not enough data

Genome context

Ultra44: 574190-574306 [+]

Mature oan-miR-1392-5p

• Accession: MIMAT0007187
• Description: Ornithorhynchus anatinus oan-miR-1392-5p mature miRNA
• Sequence: 31 - CGCUUCAUCAGGUGAAAAUGGA - 52
• Evidence: experimental ; Illumina [1]

Mature oan-miR-1392-3p

• Accession: MIMAT0007188
• Description: Ornithorhynchus anatinus oan-miR-1392-3p mature miRNA
• Sequence: 71 - CAUUUGCACCUGGUGGAGCAGC - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004