Stem-loop oan-mir-1394

Accession

MI0006905

Description

Ornithorhynchus anatinus oan-mir-1394 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

gagggagccgggccccgcgccgaccgccgggggccggcgagcuccgucugguuuccgcgccgccgcccccgcgggaggaauaaccgaccacgguucucccCCCGGGGCGCCCGAGGGGcccggccgcccc
..(((.(((((((((((((((......(((((((.((((.((.(.(........).).)))))))))))))((((.(((..(((((....))))).))).)))).)))))....))))))))))..))).

Structure

ga   -a          ----     gaccgccgggggccggcgagcuccgucugguuuccgcgccgccgcccccg    a   au     a 
  ggg  gccgggcccc    gcgcc                                                  cggg gga  aaccg c
  |||  ||||||||||    |||||                                                  |||| |||  |||||  
  ccc  cggcccGGGG    CGCGG                                                  GCCC ccu  uuggc c
-c   gc          AGCC     -------------------------------------------------G    c   -c     a 

Annotation confidence Not enough data

Genome context

Ultra454: 562401-562530 [+]

Mature oan-miR-1394

• Accession: MIMAT0007196
• Description: Ornithorhynchus anatinus oan-miR-1394 mature miRNA
• Sequence: 101 - CCCGGGGCGCCCGAGGGG - 118
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004