Stem-loop oan-mir-1399

Accession

MI0006910

Description

Ornithorhynchus anatinus oan-mir-1399 precursor miRNA

Sequence

899 reads, 1755.0 reads per million, 1 experiments

gugaaauuacUGAAUAGAUGUGAUUUGGggaaauuacaguuccuuguuuaguauguauugugcaugcccuacagccuucccuaaccaguagcucccaauuucauuuaaauuguaaugauuucc
.....(((((....((((((.((((.((((...((((.(((..((((...(((((((...)))))))...))))........)))..)))).)))))))).))))))....))))).......

Structure

--gugaa     UGAA      U    U    aaa    -a   ------cc    uua       u 
       auuac    UAGAUG GAUU GGgg   uuac  guu        uugu   guaugua  
       |||||    |||||| |||| ||||   ||||  |||        ||||   ||||||| u
       uaaug    auuuac uuaa cccu   gaug  caa        gaca   cguacgu  
ccuuuag     uuaa      u    -    --c    ac   ucccuucc    ucc       g 

Annotation confidence Not enough data

Genome context

2: 125437641-125437763 [-]

Mature oan-miR-1399-5p

• Accession: MIMAT0007202
• Description: Ornithorhynchus anatinus oan-miR-1399-5p mature miRNA
• Sequence: 11 - UGAAUAGAUGUGAUUUGG - 28
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004