Stem-loop oan-mir-1403

Accession

MI0006915

Description

Ornithorhynchus anatinus oan-mir-1403 precursor miRNA

Sequence

231 reads, 5 reads per million, 4 experiments

caaggggaggagagggugcaaccaggugugacuauccugagggcgggagcugcagguguccauacccgggcacggguccaaaugugaauaucagaggcccGUCUCCAGGUGUGAACAUCGGUggcgccgguuccuacaucuaug
..(((..(((((..(((((.(((.((((((((...((((..(((....))).)))).)))((((((.(((.(((((((....(.(((...))).)))))))).))).)))))).)))))))).)))))..)))))...)))...

Structure

-ca   -gg     ag     a   a     gacuauccugagggcgggagcugcagguguc      c   c       caaa g   a 
   agg   aggag  ggugc acc ggugu                               cauacc ggg acggguc    u uga  
   |||   |||||  ||||| ||| |||||                               |||||| ||| |||||||    | ||| u
   ucu   uccuu  ccgcg UGG CUACA                               GUGUGG CCU UGcccgg    a acu  
gua   aca     gg     g   -     ------------------------------A      A   C       ---- g   a 

Annotation confidence Not enough data

Genome context

Ultra487: 212129-212272 [+]

Mature oan-miR-1403

• Accession: MIMAT0007210
• Description: Ornithorhynchus anatinus oan-miR-1403 mature miRNA
• Sequence: 101 - GUCUCCAGGUGUGAACAUCGGU - 122
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004