Stem-loop oan-mir-138-1

Accession

MI0006919

Description

Ornithorhynchus anatinus oan-mir-138-1 precursor miRNA

Sequence

110764 reads, 2283.0 reads per million, 5 experiments

gguauggugaagcAGCUGGUGUUGUGAAUCAGGCCGucgccaaucugagaacggcuacuucacaacaccaggguugcacccugcc
((((.((((.(((..(((((((((((((...(((((((..........).))))))..))))))))))))).))).)))).))))

Structure

    u    a   AG             UCA      - gcca 
ggua ggug agc  CUGGUGUUGUGAA   GGCCGu c    a
|||| |||| |||  |||||||||||||   |||||| |     
ccgu ccac uug  gaccacaacacuu   ucggca g    u
    c    g   -g             -ca      a aguc 

Annotation confidence Not enough data

Genome context

8: 51462572-51462656 [-]

Mature oan-miR-138-5p

• Accession: MIMAT0007216
• Description: Ornithorhynchus anatinus oan-miR-138-5p mature miRNA
• Sequence: 14 - AGCUGGUGUUGUGAAUCAGGCCG - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004