miRBase entry: oan-mir-1407

Stem-loop oan-mir-1407


Accession
MI0006920
Description
Ornithorhynchus anatinus oan-mir-1407 precursor miRNA


Sequence

1 reads, 0.0 reads per million, 1 experiments
guggucccggcccaugaugagcuugcacucuaccugucagucggcuuuggacuucaugguucguguccuuaccgcuuggauauuuauacguuuAAGGAGCUGACUGGGAAAAugcgcgucuuuagggugcugauaaaccuu
..(((..((((((.(((.((((..(((.....((...((((((((((((((((....)))))((((((.........))))))............)))))))))))))....))))).)).))).)).))))....)))..

Structure
gu   --cc    -  a   u  -  uu   cucua  ugu           ggacuucaugguuc      uua 
  ggu    cggc cc uga ga gc  gca     cc   cagucggcuuu              gugucc   c
  |||    |||| || ||| || ||  |||     ||   |||||||||||              ||||||   c
  cca    gucg gg auu cu cg  cgu     GG   GUCAGUCGAGG              uauagg   g
uu   aaua    u  g   u  g  --   -AAAA  ---           --AAuuugcauauu      uuc 


Annotation confidence Not enough data
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Genome context
10: 11318714-11318854 [-]

Database links

Mature oan-miR-1407-3p

Accession MIMAT0007217
Description Ornithorhynchus anatinus oan-miR-1407-3p mature miRNA
Sequence 94 - AAGGAGCUGACUGGGAAAA - 112
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004