Stem-loop oan-mir-1415

Accession

MI0006953

Description

Ornithorhynchus anatinus oan-mir-1415 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

ggguucggucggcaggcgggugagaaaggaggcaguuuaagaagcagaacgucugcaccggcaaauaguUCUGCUUCUGAAACCACCUCCcaccuuccaccuccaccgucggaagc
.(.(((.(.(((..((.(((((.(((.(((((..((((.(((((((((((...(((....)))....))))))))))).))))..)))))....)))))))))).))).).))).)

Structure

g g   g u   ca  c     a   ---a     ca    a           -guc   a 
 g uuc g cgg  gg gggug gaa    ggagg  guuu agaagcagaac    ugc c
 | ||| | |||  || ||||| |||    |||||  |||| |||||||||||    |||  
 c aag c gcc  cc uccac cuu    CCUCC  CAAA UCUUCGUCUug    acg c
- g   g u   -a  -     -   ccac     AC    G           auaa   g 

Annotation confidence Not enough data

Genome context

X5: 541877-541992 [+]

Mature oan-miR-1415

• Accession: MIMAT0007270
• Description: Ornithorhynchus anatinus oan-miR-1415 mature miRNA
• Sequence: 70 - UCUGCUUCUGAAACCACCUCC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004