Stem-loop oan-mir-7-3

Accession

MI0006961

Description

Ornithorhynchus anatinus oan-mir-7-3 precursor miRNA

Sequence

15348 reads, 438 reads per million, 5 experiments

gccgggccccgucUGGAAGACUAGUGAUUUUGUUGUucucuagcugaccgcacgaCAACAAAUCCCAGUCUGCCUGAcggugcccggu
(((((((.(((((.((.(((((.(.(((((.((((((.....((.....))..)))))))))))).))))).)).))))).)))))))

Structure

       c     U  A     A U     U      cucua  u 
gccgggc ccguc GG AGACU G GAUUU GUUGUu     gc g
||||||| ||||| || ||||| | ||||| ||||||     || a
uggcccg ggcAG CC UCUGA C CUAAA CAACag     cg c
       u     U  G     C -     -      ---ca  c 

Annotation confidence High

Genome context

Contig9060: 713-800 [-]

Mature oan-miR-7-5p

• Accession: MIMAT0006986
• Description: Ornithorhynchus anatinus oan-miR-7-5p mature miRNA
• Sequence: 14 - UGGAAGACUAGUGAUUUUGUUGU - 36
• Evidence: experimental ; Illumina [1]

Mature oan-miR-7-3p

• Accession: MIMAT0006987
• Description: Ornithorhynchus anatinus oan-miR-7-3p mature miRNA
• Sequence: 56 - CAACAAAUCCCAGUCUGCCUGA - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004