Dead hairpin entry

Stem-loop osa-MIR810b

Accession

MI0006986

Description

Oryza sativa osa-MIR810b precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

5 open access papers mention osa-MIR810b
(6 sentences)

Sequence

414035 reads, 1881.0 reads per million, 142 experiments

agcccaccacauguggcucgcaugcuuaaauaacuaacggcauaauuagaucacUUGAUGACGACGUAUAUCGGUguucgcuauauauacuaucuacugguaaguauaucuuuaauauacuuaccaguagauaguauauauagUGAACACCGAUAUGCGUCAUCaucaagugauuuaauuaugccguuaguuaagcaugcgagccacauguggugagcuuacg
(((.((((((((((((((((((((((((....(((((((((((((((((((((((((((((.(((((((((((((((((((((((((((((((((((((((((((((((.....))))))))))))))))))))))))))))))))))))))))))))))).))))))))))))))))))))))))))))))))))))))))))))))))))))).)))....

Structure

----   c                        aaua                             C                                               c 
    agc caccacauguggcucgcaugcuua    acuaacggcauaauuagaucacUUGAUGA GACGUAUAUCGGUguucgcuauauauacuaucuacugguaaguauau u
    ||| ||||||||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| u
    ucg gugguguacaccgagcguacgaau    ugauugccguauuaauuuagugaacuaCU CUGCGUAUAGCCACAAGUgauauauaugauagaugaccauucauaua u
gcau   a                        ----                             A                                               a