Stem-loop gga-mir-1434

Accession

MI0006992

Description

Gallus gallus gga-mir-1434 precursor miRNA

Literature search

2 open access papers mention gga-mir-1434
(5 sentences)

Sequence

92614 reads, 80.0 reads per million, 212 experiments

aGUGCGUGAUGAUGGAAAAUUucuucacuuugaccugacuuguuugauugaagAAAUUUGAGUAUCUGACGcgagcu
..(((((.(.((((..(((((((((((.((.(((.......))).)).)))))))))))...))))).)))))....

Structure

--aG     G U    -GA           c  u   cu 
    UGCGU A GAUG   AAAUUucuuca uu gac  g
    ||||| | ||||   ||||||||||| || |||  a
    gcGCA U CUAU   UUUAAAgaagu ag uug  c
ucga     G -    GAG           u  u   uu 

Annotation confidence Medium

Genome context

28: 1881804-1881880 [+]

Mature gga-miR-1434-5p

• Accession: MIMAT0007295
• Description: Gallus gallus gga-miR-1434-5p mature miRNA
• Sequence: 2 - GUGCGUGAUGAUGGAAAAUU - 21
• Evidence: experimental ; cloned [1]

Mature gga-miR-1434-3p

• Accession: MIMAT0051223
• Description: Gallus gallus gga-miR-1434-3p mature miRNA
• Sequence: 54 - AAAUUUGAGUAUCUGACG - 71
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004