Stem-loop oan-mir-1421y-3

Accession

MI0006994

Description

Ornithorhynchus anatinus oan-mir-1421y-3 precursor miRNA

Sequence

188 reads, 162 reads per million, 2 experiments

auggcacggugugAGGAGGGCACAUGUGGUACAGUgugauaguggaauaugcUGCAUCAUGCGUGACCUCCCCacaucguguugu
(((((((((((((.(((((.(((.((((((.(((((((.........))))))).)))))).))).))))).)))))))))))))

Structure

             A     G   A      A       aua 
auggcacggugug GGAGG CAC UGUGGU CAGUgug   g
||||||||||||| ||||| ||| |||||| |||||||   u
uguugugcuacaC CCUCC GUG GUACUA GUcguau   g
             C     A   C      C       aag 

Annotation confidence Not enough data

Genome context

X1: 44303056-44303140 [-]

Clustered miRNAs

12 other miRNAs are < 10 kb from oan-mir-1421y-3

Mature oan-miR-1421y-5p

• Accession: MIMAT0007244
• Description: Ornithorhynchus anatinus oan-miR-1421y-5p mature miRNA
• Sequence: 14 - AGGAGGGCACAUGUGGUACAGU - 35
• Evidence: experimental ; Illumina [1]

Mature oan-miR-1421y-3-3p

• Accession: MIMAT0009173
• Description: Ornithorhynchus anatinus oan-miR-1421y-3-3p mature miRNA
• Sequence: 53 - UGCAUCAUGCGUGACCUCCCC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004