Stem-loop oan-mir-1421ah

Accession

MI0007001

Description

Ornithorhynchus anatinus oan-mir-1421ah precursor miRNA

Sequence

869 reads, 1551 reads per million, 1 experiments

gaccuaccacacggugugAGGAGGACACAUGUGGGUGCAgugugauaguagaauaugcUGCAUAAUGUGUGGCCUCCccacacuguguuguguc
....(((.((((((((((.(((((.(((((((..((((((((((.........)))))))))).))))))).))))).)))))))))).)))..

Structure

gacc   c          A     A       GG          aua 
    uac acacggugug GGAGG CACAUGU  GUGCAgugug   g
    ||| |||||||||| ||||| |||||||  ||||||||||   u
    gug ugugucacac CCUCC GUGUGUA  UACGUcguau   a
--cu   u          c     G       -A          aag 

Annotation confidence Not enough data

Genome context

X1: 44321166-44321259 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from oan-mir-1421ah

Mature oan-miR-1421ah-5p

• Accession: MIMAT0007303
• Description: Ornithorhynchus anatinus oan-miR-1421ah-5p mature miRNA
• Sequence: 19 - AGGAGGACACAUGUGGGUGCA - 39
• Evidence: experimental ; Illumina [1]

Mature oan-miR-1421ah-3p

• Accession: MIMAT0007304
• Description: Ornithorhynchus anatinus oan-miR-1421ah-3p mature miRNA
• Sequence: 59 - UGCAUAAUGUGUGGCCUCC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004