Stem-loop oan-mir-1421g-2

Accession

MI0007005

Description

Ornithorhynchus anatinus oan-mir-1421g-2 precursor miRNA

Sequence

4408 reads, 1890 reads per million, 4 experiments

ggugacguacggcacggugcgAGGGGGUCGUACGUCAUGCAGAgugauggcggaauaugcUGCAUGCGUGCGACCUCCUUacacagcacugggugucucc
((.((((..(((..(.(((.((((((((((((((.(((((((....((......))...))))))))))))))))))))).))).)..)))..)))).))

Structure

  u    ua   ca g   c              U       Agug  gg 
gg gacg  cgg  c gug gAGGGGGUCGUACG CAUGCAG    au  c
|| ||||  |||  | ||| |||||||||||||| |||||||    ||   
cc cugu  guc  g cac UUCCUCCAGCGUGC GUACGUc    ua  g
  u    gg   ac a   a              -       -gua  ag 

Annotation confidence Not enough data

Genome context

Contig7160: 3551-3650 [-]

Clustered miRNAs

13 other miRNAs are < 10 kb from oan-mir-1421g-2

Mature oan-miR-1421g-5p

• Accession: MIMAT0006975
• Description: Ornithorhynchus anatinus oan-miR-1421g-5p mature miRNA
• Sequence: 22 - AGGGGGUCGUACGUCAUGCAGA - 43
• Evidence: experimental ; Illumina [1]

Mature oan-miR-1421g-2-3p

• Accession: MIMAT0009176
• Description: Ornithorhynchus anatinus oan-miR-1421g-2-3p mature miRNA
• Sequence: 61 - UGCAUGCGUGCGACCUCCUU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004