Dead hairpin entry

Stem-loop osa-MIR1436

Accession

MI0007022

Description

Oryza sativa osa-MIR1436 precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

15 open access papers mention osa-MIR1436
(49 sentences)

Sequence

58235 reads, 227.0 reads per million, 142 experiments

aguuuaugugcUACUCCCUCCGUCCCAUAAUAUuaaaaccuaggacuggauaggacguuucauaguacaaugacucagagucauuguacuaugaaacguccuauccaguccuagguuuuaacAUUAUGGGACGGAGGGAGUAGUcucaaccuauauaaacu
(((((((((((((((((((((((((((((((.(((((((((((((((((((((((((((((((((((((((((((...))))))))))))))))))))))))))))))))))))))))))).))))))))))))))))))))))........)))))))))

Structure

         --------                      A                                           c 
aguuuaugu        gcUACUCCCUCCGUCCCAUAAU Uuaaaaccuaggacuggauaggacguuucauaguacaaugacu  
|||||||||        |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| a
ucaaauaua        UGAUGAGGGAGGCAGGGUAUUA aauuuuggauccugaccuauccugcaaaguaucauguuacuga  
         uccaacuc                      c                                           g