Dead hairpin entry

Stem-loop osa-MIR1437a

Accession

MI0007024

Description

Oryza sativa osa-MIR1437a precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention osa-MIR1437a
(1 sentences)

Sequence

67420 reads, 337.0 reads per million, 139 experiments

gcgcgcggggagggaGGGAACGGUGCCUAGUGCGGCAccggagcucgccagcacgcaggagugaggugaggaggacggcggccagggcgcggagagcuugccggcgcuccgccaccgccgcuaccuccuuccgcgugcuggcgagcuccggcgccgcACUAGGCACUGUUUCCUCCCUccccacgcgc
(((((.((((((((((((((((((((((((((((((.(((((((((((((((((((.(((........((((((..((((((..((..((((((.(((....))).))))))..)))))))).)))))))))))))))))))))))))))).)))))))))))))))))))))))))))))).)))))

Structure

     c                              A                   a   gugaggug      ac      ca  gc      a   u 
gcgcg ggggagggaGGGAACGGUGCCUAGUGCGGC ccggagcucgccagcacgc gga        aggagg  ggcggc  gg  gcggag gcu g
||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||        ||||||  ||||||  ||  |||||| |||  
cgcgc ccccUCCCUCCUUUGUCACGGAUCAcgccg ggccucgagcggucgugcg ccu        uccucc  ucgccg  cc  cgccuc cgg c
     a                              c                   -   --------      -a      --  ac      g   c