Stem-loop osa-MIR1438

Accession

MI0007025

Description

Oryza sativa osa-MIR1438 precursor miRNA

Sequence

guugugauauaagguuuuAGGGUAAUUUUAUCAUUUUUAAgaaaacaaaauuuaauaccuucagauauucgguaucuauguaaaaaauuuuuagaucccucaauaaaauuuaauaccuaaaaucuaaacguauuaaauuuuguuuucuuaaaaauuauaaaauuacccuaauacauaauaccucaau
((((.(.(((...((.(((((((((((((((.((((((((((((((((((((((((((.((.((((.((.(((((.........(((((((.............))))))).))))).)).)))).)).)))))))))))))))))))))))))).))))))))))))))).))...))).).))))

Structure

    u a   aag  u               C                          c  c    a  c     cuauguaaa       uagau 
guug g uau   gu uuAGGGUAAUUUUAU AUUUUUAAgaaaacaaaauuuaauac uu agau uu gguau         aaauuuu     c
|||| | |||   || ||||||||||||||| |||||||||||||||||||||||||| || |||| || |||||         |||||||     c
uaac c aua   ca aaucccauuaaaaua uaaaaauucuuuuguuuuaaauuaug aa ucua aa ccaua         uuuaaaa     c
    u c   aua  u               u                          c  a    a  u     --------a       uaacu 

Annotation confidence Not enough data

Genome context

Chr10: 8429612-8429798 [+]

Mature osa-miR1438

• Accession: MIMAT0005989
• Description: Oryza sativa osa-miR1438 mature miRNA
• Sequence: 19 - AGGGUAAUUUUAUCAUUUUUAA - 40
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18312648
   Identification of novel and candidate miRNAs in rice by high throughput sequencing
   Sunkar R, Zhou X, Zheng Y, Zhang W, Zhu JK
   BMC Plant Biol (2008) 8:25