Dead hairpin entry

Stem-loop osa-MIR1441

Accession

MI0007029

Description

Oryza sativa osa-MIR1441 precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

4 open access papers mention osa-MIR1441
(6 sentences)

Sequence

264159 reads, 946.0 reads per million, 142 experiments

guuuuuucAUUCGUGUCCGAAAACUCCUUuugauaucuggucaaacauucgaugugacaucuaaaaauuuucuuuucgcgaacuaagggccuguuuaguucgcgaaaagaaaAUUUUUGGGUGUCACAUCGGACGUuuaaccggaugucggaaaagguuuucagacacgaauaaaaaaac
(((((((.(((((((((.(((((((..((((((((((((((.((((.((((((((((((((((((((((((((((((((((((((((......)))))))))))))))))))))))))))))))))))))))).)))).))))))))))))))..))))))).))))))))).)))))))

Structure

       c         C       CC              c    a                                        gg 
guuuuuu AUUCGUGUC GAAAACU  UUuugauaucuggu aaac uucgaugugacaucuaaaaauuuucuuuucgcgaacuaag  c
||||||| ||||||||| |||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||   
caaaaaa uaagcacag cuuuugg  aaggcuguaggcca uuUG AGGCUACACUGUGGGUUUUUAaaagaaaagcgcuugauuu  c
       a         a       aa              a    C                                        gu