Stem-loop ptc-MIR827

Accession

MI0007041

Description

Populus trichocarpa ptc-MIR827 precursor miRNA

Literature search

2 open access papers mention ptc-MIR827
(9 sentences)

Sequence

caugaauauauuuguugauagucaucuagugaacauugaaagucauaUUAGAUGACCAUCAACGAAAAcauucaug
(((((((...(((((((((.(((((((((((.((.......))..))))))))))).)))))))))...)))))))

Structure

       aua         a           -a  au 
caugaau   uuuguugau gucaucuagug  ac  u
|||||||   ||||||||| |||||||||||  ||  g
guacuua   AAGCAACUA CAGUAGAUUau  ug  a
       cAA         C           ac  aa 

Annotation confidence Not enough data

Genome context

CM000343.2: 120916-120991 [+]

Mature ptc-miR827

• Accession: MIMAT0006003
• Description: Populus trichocarpa ptc-miR827 mature miRNA
• Sequence: 48 - UUAGAUGACCAUCAACGAAAA - 68
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18363789
   Stress-responsive microRNAs in Populus
   "Lu S, Sun YH, Chiang VL"
   "Plant J (2008) 55:131-151