Stem-loop ptc-MIR1449

Accession

MI0007049

Description

Populus trichocarpa ptc-MIR1449 precursor miRNA

Sequence

gauuaguUGAGGUGCACGUAAGAUAACUCgauguuaauuuaaaaaaacaaacaggaucucaauaaaauaaauuuaaaaaauacagaaggguaaauagugcuugcauuaauuaauc
(((((((((..(((((.(((.....((((..(((...((((((............................))))))....)))...))))......))).))))))))))))))

Structure

         AG     C   -AGAUA    -ga   -uaa      aaaacaaacagga 
gauuaguUG  GUGCA GUA      ACUC   ugu    uuuaaa             u
|||||||||  ||||| |||      ||||   |||    ||||||              
cuaauuaau  uacgu cgu      uggg   aca    aaauuu             c
         --     u   gauaaa    aag   uaaa      aaauaaaauaacu 

Annotation confidence Not enough data

Genome context

CM000338.2: 22334008-22334122 [+]

Mature ptc-miR1449

• Accession: MIMAT0006011
• Description: Populus trichocarpa ptc-miR1449 mature miRNA
• Sequence: 8 - UGAGGUGCACGUAAGAUAACUC - 29
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18363789
   Stress-responsive microRNAs in Populus
   "Lu S, Sun YH, Chiang VL"
   "Plant J (2008) 55:131-151