Stem-loop ptc-MIR1450

Accession

MI0007050

Description

Populus trichocarpa ptc-MIR1450 precursor miRNA

Literature search

1 open access papers mention ptc-MIR1450
(6 sentences)

Sequence

gagucaauuaggucaguuguguagucugacccgagccauugaagacaaucauuuguuggugucucauuggauuuguuaccugacaguguuuauccaacaaaugauucucUUCAAUGGCUCGGUCAGGUUACacaagcaaucuaguuggcuc
(((((((((((((...(((((((((((((((.(((((((((((((.(((((((((((((.....(((((..............))))).....))))))))))))).))))))))))))))))))))))))))))...)))))))))))))

Structure

             cag               c             c             ugucu     gauuug 
gagucaauuaggu   uuguguagucugacc gagccauugaaga aaucauuuguugg     cauug      u
|||||||||||||   ||||||||||||||| ||||||||||||| |||||||||||||     |||||       
cucgguugaucua   aacaCAUUGGACUGG CUCGGUAACUUcu uuaguaaacaacc     gugac      u
             acg               -             c             uauuu     agucca 

Annotation confidence Not enough data

Genome context

CM000340.2: 21413342-21413492 [-]

Mature ptc-miR1450

• Accession: MIMAT0006012
• Description: Populus trichocarpa ptc-miR1450 mature miRNA
• Sequence: 110 - UUCAAUGGCUCGGUCAGGUUAC - 131
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18363789
   Stress-responsive microRNAs in Populus
   "Lu S, Sun YH, Chiang VL"
   "Plant J (2008) 55:131-151