Stem-loop gma-MIR1512a

Accession

MI0007224

Description

Glycine max gma-MIR1512a precursor miRNA

Literature search

11 open access papers mention gma-MIR1512a
(26 sentences)

Sequence

10063 reads, 107.0 reads per million, 138 experiments

ucuugauuccUAACUGAAAAUUCUUAAAGUauucccaucaucgaaaugaaaugaagauugggaaUGCUUUAAGAAUUUCAGUUAUgcaucaauca
..(((((.(.(((((((((.(((((((((((((((((((.(((........))).)).)))))))))))))))))))))))))).).)))))...

Structure

-uc     u c         A                 -  a   aaa 
   uugau c UAACUGAAA UUCUUAAAGUauuccca uc ucg   u
   ||||| | ||||||||| ||||||||||||||||| || |||    
   aacua g AUUGACUUU AAGAAUUUCGUaagggu ag agu   g
acu     c U         -                 u  a   aaa 

Annotation confidence Medium

Genome context

chr18: 56521611-56521705 [+]

Mature gma-miR1512a-5p

• Accession: MIMAT0007370
• Description: Glycine max gma-miR1512a-5p mature miRNA
• Sequence: 11 - UAACUGAAAAUUCUUAAAGU - 30
• Evidence: experimental ; 454 [1]

Mature gma-miR1512a-3p

• Accession: MIMAT0032030
• Description: Glycine max gma-miR1512a-3p mature miRNA
• Sequence: 65 - UGCUUUAAGAAUUUCAGUUAU - 85
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18402695
   Novel and nodulation-regulated microRNAs in soybean roots
   Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
   BMC Genomics (2008) 9:160


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153