Stem-loop gma-MIR1518

Accession

MI0007231

Description

Glycine max gma-MIR1518 precursor miRNA

Literature search

2 open access papers mention gma-MIR1518
(2 sentences)

Sequence

augugcaaaaUGUGUUGUAAAGUGAAUAUCAucggcacauaggucaugagaucaacauugacagauuuacaggcagccuugacgugagaacacgauaaauguuuagccugauauucaccacaaucacacuuuuggaau
...(.(((((((((((((...((((((((((..(((((((((((..(((((((..........))))).))....))))...((((....))))....))))...))))))))))))).)))).)))).))))).)..

Structure

aug g     -    -    AAA          uc   ---    -------------------    --ca  -     aaca 
   u caaaa UGUG UUGU   GUGAAUAUCA  ggc   acau                   aggu    ug agauc    u
   | ||||| |||| ||||   ||||||||||  |||   ||||                   ||||    || |||||     
   a guuuu acac aaca   cacuuauagu  ccg   ugua                   uccg    ac uuuag    u
-ua g     c    u    --c          --   auu    aauagcacaagagugcagu    acgg  a     acag 

Annotation confidence Not enough data

Genome context

chr9: 7525122-7525259 [+]

Mature gma-miR1518

• Accession: MIMAT0007377
• Description: Glycine max gma-miR1518 mature miRNA
• Sequence: 11 - UGUGUUGUAAAGUGAAUAUCA - 31
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18402695
   Novel and nodulation-regulated microRNAs in soybean roots
   Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
   BMC Genomics (2008) 9:160