Dead hairpin entry

Stem-loop gma-MIR1520a

Accession

MI0007235

Description

Glycine max gma-MIR1520a precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention gma-MIR1520a
(2 sentences)

Sequence

41177 reads, 121.0 reads per million, 178 experiments

aaaggaauguugaccgucaugugucaugUUCUUAUUGGAUGAUGACUGUugugucauguucugauuggucaaugaaaauaacaaugcauuucaucuuuuauggaguugacauccaauUAGAACAUGAUACAUGACAGUCAucauccaaua
..((((((((.(((........)))))))))))((((((((((((((((((((((((((((((((((((((((....((((..(((.....)))...))))...)))))...)))))))))))))))))))..)))))))))))))))).

Structure

aaaggaauguugaccgucaugugucaugUUCUU                --                   ---     gaaa    -ca   c 
                                 AUUGGAUGAUGACUGU  ugugucauguucugauugg   ucaau    auaa   aug a
                                 ||||||||||||||||  |||||||||||||||||||   |||||    ||||   ||| u
                                 uaaccuacuACUGACA  ACAUAGUACAAGAUuaacc   aguug    uauu   uac u
--------------------------------a                GU                   uac     -agg    uuc   u