Dead hairpin entry

Stem-loop gma-MIR1521a

Accession

MI0007236

Description

Glycine max gma-MIR1521a precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention gma-MIR1521a
(3 sentences)

Sequence

6974 reads, 23.0 reads per million, 173 experiments

uacucauUGACUGUUAAUGGAAAAUGUUGACugccaaaugucauaauccuauuggauguuaaaauuguauacgaaaauucacguccaauaugauuaugacauaugacaguuaacguuacccauUAACAGUCAACGUCCAAUaaaauugugacacauaacagucaacauuauucaauaacaauuaauguuc
......((((((((((((((..(((((((((((.((.(((((((((((.((((((((((...((((.........)))).)))))))))).))))))))))).)).)))))))))))..)))))))))))))).(((((((...)))).)))...........(((((((............))))))).

Structure

---------------------------------------------------uacuca              AA           c  a           c          uaa    gua 
                                                         uUGACUGUUAAUGG  AAUGUUGACug ca augucauaauc uauuggaugu   aauu   u
                                                         ||||||||||||||  ||||||||||| || ||||||||||| ||||||||||   ||||   a
                                                         AACUGACAAUuacc  uugcaauugac gu uacaguauuag auaaccugca   uuaa   c
cuuguaauuaacaauaacuuauuacaacugacaauacacaguguuaaaaUAACCUGC              ca           a  a           u          --c    aag