Stem-loop gma-MIR1522

Accession

MI0007237

Description

Glycine max gma-MIR1522 precursor miRNA

Literature search

1 open access papers mention gma-MIR1522
(7 sentences)

Sequence

uacagacaaaUUUAUUGCUUAAAAUGAAAUuaaccaacuuucuuaaaaugcauaaaauaguuaauguuuuauaauuaguaugauuacccguguaauguaacauugugauuuuucuaauucaugauaaagugauugaaaauaauuauaagaguuaguuuaauuuaauuuuaaagaauaauuaauaaaua
...........(((((..(((((((.((((((((.((((((..(((.....((((((((.....)))))))).(((((...((((((..((((......)))).))))))...)))))((((......))))..........)))..)))))).).))))))).)))))))..)))))..........

Structure

uacagacaaaU     GC       G       - c      cu   aaugcauaaaauaguuaauguuuuaua     uau      cc    aa 
           UUAUU  UUAAAAU AAAUuaa c aacuuu  uaa                           auuag   gauuac  gugu  u
           |||||  ||||||| ||||||| | ||||||  |||                           |||||   ||||||  ||||   
           aauaa  aauuuua uuuaauu g uugaga  auu                           uaauc   uuagug  uaca  g
-auaaauaauu     ga       a       u a      au   ---aauaaaaguuagugaaauaguacu     uuu      -u    au 

Annotation confidence Not enough data

Genome context

chr4: 13894953-13895140 [+]

Mature gma-miR1522

• Accession: MIMAT0007383
• Description: Glycine max gma-miR1522 mature miRNA
• Sequence: 11 - UUUAUUGCUUAAAAUGAAAU - 30
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18402695
   Novel and nodulation-regulated microRNAs in soybean roots
   Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
   BMC Genomics (2008) 9:160