Dead hairpin entry

Stem-loop gma-MIR1522

Accession

MI0007237

Description

Glycine max gma-MIR1522 precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention gma-MIR1522
(5 sentences)

Sequence

327 reads, 18.0 reads per million, 106 experiments

uacagacaaaUUUAUUGCUUAAAAUGAAAUuaaccaacuuucuuaaaaugcauaaaauaguuaauguuuuauaauuaguaugauuacccguguaauguaacauugugauuuuucuaauucaugauaaagugauugaaaauaauuauaagaguuaguuuaauuuaauuuuaaagaauaauuaauaaaua
...........(((((..(((((((.((((((((.((((((..(((.....((((((((.....)))))))).(((((...((((((..((((......)))).))))))...)))))((((......))))..........)))..)))))).).))))))).)))))))..)))))..........

Structure

uacagacaaaU     GC       G       - c      cu   aaugcauaaaauaguuaauguuuuaua     uau      cc    aa 
           UUAUU  UUAAAAU AAAUuaa c aacuuu  uaa                           auuag   gauuac  gugu  u
           |||||  ||||||| ||||||| | ||||||  |||                           |||||   ||||||  ||||   
           aauaa  aauuuua uuuaauu g uugaga  auu                           uaauc   uuagug  uaca  g
-auaaauaauu     ga       a       u a      au   ---aauaaaaguuagugaaauaguacu     uuu      -u    au