Dead hairpin entry

Stem-loop gma-MIR1520b

Accession

MI0007243

Description

Glycine max gma-MIR1520b precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention gma-MIR1520b
(2 sentences)

Sequence

54747 reads, 144.0 reads per million, 178 experiments

cgugucACGUUCUUAUUGAAUGAUGACUauuacgugucauguucugaucgaccaaugacaacaacaauaauucgacauccAAUCAGAACAUGACACGUGACAGUcaucauuuaauaagaacgugacaua
.(((((((((((((((((((((((((((.((((((((((((((((((((((....................)))).......)))))))))))))))))).))))))))))))))))))))))))))).

Structure

c                           a                  -------    ccaaugaca 
 gugucACGUUCUUAUUGAAUGAUGACU uuacgugucauguucuga       ucga         a
 ||||||||||||||||||||||||||| ||||||||||||||||||       ||||          
 uacagugcaagaauaauuuacuacUGA AGUGCACAGUACAAGACU       agcu         c
a                           C                  AAccuac    uaauaacaa