Stem-loop gma-MIR1526

Accession

MI0007244

Description

Glycine max gma-MIR1526 precursor miRNA

Sequence

30607 reads, 184.0 reads per million, 178 experiments

aacaaaaauuuuauuuuucuucuuccggaucaaguugauccggaucuuccggAUCAACUUGAUCCGUAAGagacuuccggauuaaguugauccagaaguuACGGAUCAAGUUAAUCcagaagagacuuucggaucaacugauccggaagaggaaaauuaagcaaggauaauuuu
.........((((.((((((((((((((((((.((((((((((((((((.((((.(((((((((((((....(((((.((((((...)))))).)))))))))))))))))).)))).)))))....))))))))))))))))))))))))))))).)))).............

Structure

----aacaaaaau    u                  a           ----     c    C             AGag     c      a 
             uuua uuuucuucuuccggauca guugauccgga    ucuuc ggAU AACUUGAUCCGUA    acuuc ggauua  
             |||| |||||||||||||||||| |||||||||||    ||||| |||| |||||||||||||    ||||| |||||| g
             gaau aaaaggagaaggccuagu caacuaggcuu    agaag cCUA UUGAACUAGGCAu    ugaag ccuagu  
uuuuaauaggaac    u                  -           ucag     a    A             ----     a      u 

Annotation confidence Medium

Genome context

chr16: 6139320-6139493 [+]

Mature gma-miR1526-5p

• Accession: MIMAT0054040
• Description: Glycine max gma-miR1526-5p mature miRNA
• Sequence: 53 - AUCAACUUGAUCCGUAAG - 70
• Evidence: experimental ; unknown

Mature gma-miR1526-3p

• Accession: MIMAT0007388
• Description: Glycine max gma-miR1526-3p mature miRNA
• Sequence: 101 - ACGGAUCAAGUUAAUC - 116
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18402695
   Novel and nodulation-regulated microRNAs in soybean roots
   Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
   BMC Genomics (2008) 9:160